wjs018

joined 2 years ago
[–] wjs018@beehaw.org 4 points 2 years ago

The fine is from an unrelated, earlier incident in Alabama. From what I found on jalopnik:

Earlier this year, a worker was killed by being sucked into an airplane engine in Alabama on New Year’s Eve. The employee in that scenario was warned several times that the plane’s engines would be on, however. Still, OSHA hit the small airline Piedmont with a fine of $15,625 in the workers death.

This incident with Delta that happened in Texas is under investigation.

[–] wjs018@beehaw.org 1 points 2 years ago

That is true. Vertex claims that some of the follow-up therapies to this do not require immunosuppressants, so time will tell.

From a strategic perspective, I wonder if they will proceed with Phase 3 or not. I have worked on several programs in the past where we pushed through to Phase 2 to get a proof of concept in humans before scrapping the program because we have a better version of the molecule (using the same mechanism of action) getting ready right behind it. This therapy from Vertex may have proven the concept to allow a better version to come next.

[–] wjs018@beehaw.org 3 points 2 years ago (1 children)

That's fair. I couldn't find much info on their website, so I assumed this was another make insulin cheap using "biohacking" deal. I don't have any experience with small molecule synthesis or dry powder manufacturing, so I can't really speak to how feasible this may be. However, having seen first-hand all the ways simple manufacturing steps can go wrong, the risk of consuming a medication that hasn't been through rigorous QA/QC makes me very wary.

[–] wjs018@beehaw.org 21 points 2 years ago (3 children)

Apologies for the long post. I don't mean this as an attack on OP, just trying to illustrate why actually doing this is a bad idea.

I have seen efforts like this in the past, especially centered around efforts to manufacture insulin cheaply. While I get that medicine cost and availability is broken at a fundamental level in the US, the solution is a political one rather than to run a wildcat bioreactor. There is simply no way to safely manufacture biologics using a 3d printed bioreactor. Let's look at the manufacturing process to get an idea of why.

Staring with the bioreactor, you would need some way to sterilize it before use (not just sanitize, there's a difference). There are plastic bioreactors that are used in industry, but they are large, single-use bags that are sterilized using gamma or x-ray radiation. Most industry bioreactors are made of stainless steel to withstand the harsh treatment required to re-sterilize them (steam or hydrogen peroxide).

Moving down the chain from the bioreactor, you need some way to remove your product from the harvested liquid. This is usually done through lysing the cells you have grown and then running this lysate through a series of chromatography columns of varying types (affinity, ionic, etc.) to systematically remove all the junk left over from your cellular media and the cells you have lysed. Even if you could (unsafely) grow your cells and drug in a 3d printed bioreactor, you don't have these kinds of things at home and can't just get them from Amazon.

However, let's say that you could get past the purification step, what's next? You find yourself with a large volume of very dilute medicine suspended in a chromatography buffer. The next step is what is called UF/DF, or ultra-filtration/dia-filtration. This step, paradoxically done DF first, uses filter membranes and large amounts of buffer and some pressure to first swap out the buffer that your medicine is in to the target formulation that you want to inject and then concentrate it down to a manageable volume. If you are working at small scale, then you can probably replace this step with just one filter and a centrifuge. Remember that while you are doing all this, everything that comes into contact with your drug needs to be sterile (even the air).

I think I have made my point, but for actual drugs there are more steps beyond this. Post-UF/DF is what is referred to as drug substance (DS) in the industry. You still need to go through a sterile fill-finish process to get drug product (DP) that is what is actually given to a patient. If you really want, I can go on another long tirade here since this is the step my job focuses on.

I have worked on these manufacturing processes and seen them fail a lot for very hard to catch problems. Without all the in-process controls and testing we do, there would have been serious risks of giving bad DP to patients. If you have read this far, then I hope I've convinced you not to give this kind of thing a try.

The real problem this is trying to solve is a political one. We should be advocating for better access to medications and reforming how costs are dealt with. It doesn't matter what your political persuasion is, I think everyone agrees healthcare in the US is broken and it's time something is done about it.

[–] wjs018@beehaw.org 2 points 2 years ago (1 children)

This might not quite be what you are looking for, but my favorite piece of writing that is science-adjacent is Surely You're Joking, Mr. Feynman!.

As for current stuff, I work in pharma development, so there aren't great sources out there. A lot of the studies that are published in places like phys.org or medicalxpress.com (or other wire-like services) pertain to very early stage drug discovery things, not formulation and device development. I tend to keep a tab open to fiercepharma and fiercebiotech for industry news. Other than that, there are a handful of academics that tend to share papers on linkedin or twitter that usually get passed around in the office if people find it interesting.

[–] wjs018@beehaw.org 4 points 2 years ago

I am glad I don't work in the clinical trial design space. It is already complicated enough to design a good clinical trial and this adds a whole other layer of complexity to it.

A sad component to this is that women are already underrepresented in clinical trials and this is likely to exacerbate the problem.

[–] wjs018@beehaw.org 4 points 2 years ago

It hopefully should. One of the main reasons biologics are so expensive isn't just corporate greed (though it is that too), but because the manufacturing process is very intense. Running bioreactors at commercial scale to make your product, using a train of chromatography steps to purify it, and then filtering it to be concentrated and sterile before fill/finish in a pre-filled syringe or vial followed sometimes by lyophilization is an insanely complicated process that is very costly. mRNA processes simplify this a lot in that the mRNA don't need to be manufactured using bioreactors that are filled with dirty cellular flotsam and jetsam that need removed. So, the production and purification parts are much much simpler. It still isn't likely to be cheap, as GMP manufacturing is still complex and the fill/finish part of the operations are largely unchanged, but hopefully cheaper.

 

cross-posted from: https://beehaw.org/post/720520

This summarizes a report from Parks Canada about the reintroduction of bison to the Banff National Park.

A Parks Canada report published this week concluded that the reintroduction was a success, and it suggested that due to their robust growth rate, this bison subpopulation—one of only five that occupy a mere 0.5 percent of their original range in North America—may no longer be considered endangered within a decade.

Original report: https://parks.canada.ca/pn-np/ab/banff/info/gestion-management/bison/rapport-mai-reintroduction-may-report

 

This summarizes a report from Parks Canada about the reintroduction of bison to the Banff National Park.

A Parks Canada report published this week concluded that the reintroduction was a success, and it suggested that due to their robust growth rate, this bison subpopulation—one of only five that occupy a mere 0.5 percent of their original range in North America—may no longer be considered endangered within a decade.

Original report: https://parks.canada.ca/pn-np/ab/banff/info/gestion-management/bison/rapport-mai-reintroduction-may-report

[–] wjs018@beehaw.org 1 points 2 years ago (1 children)

This is neither here nor there, but I just want to compliment whoever did their favicon. I didn't realize favicons could be animated like that, I am surprised I don't see it more often.

[–] wjs018@beehaw.org 2 points 2 years ago

I commented this in a different thread on this news story, but this approval in an interesting one in that it has been approved using the accelerated approval pathway because there was an unmet clinical need. However, if you look at the clinical landscape, there are other options for treatment (also from Sarepta I should mention). Additionally, the interim clinical data showed protein expression which is what the FDA cited in their approval, however that interim data did not show significant positive clinical benefit. From PBS:

FDA scientists detailed a long list of concerns with the company’s research, particularly a mid-stage study that the company submitted for FDA review. Overall, it failed to show that boys who received the therapy performed significantly better on measures like standing, walking and climbing than those who got a dummy treatment

Accelerated approval pathways make sense in many cases they are used, however, the agency should beware allowing accelerated approval being abused by drugmakers to get a drug to market quickly and then slow-walk the post-approval obligations (which are usually very expensive phase 3 studies). Being too liberal with accelerated approvals incentivizes questionably efficacious therapies that are simply used as a profit tool before the data shows the full extent of their clinical impact.

I recently posted an opinion piece that talks about this in some more detail and provided some additional thoughts in that thread. I am not a specialist when it comes to regulatory practices or strategy, but simply a scientist in the field that is concerned about potential abuse of a regulatory mechanism that has the potential to cause harm to patients.

[–] wjs018@beehaw.org 6 points 2 years ago (3 children)

I work in this field and this is a great summary of mRNA and its therapeutic usage. The article does mention it, but mRNA is going to be widely used beyond vaccines as well.

As an example, at a previous company I worked at that had a robust pipeline and a portfolio of antibodies on the market, they were actively developing an mRNA-LNP version of all of their mAb programs. The idea is that if you develop an LNP platform that can reproducibly transfect say, the liver, then you can just turn the liver into a protein factory for anything you provide the mRNA sequence for. Having mAbs produced and excreted in the body solves one of the big challenges to convenient biologics dosing, bioavailability. Basically, a lot of antibodies, when injected under the skin, have trouble making it from the injection site to your bloodstream. This can be solved by administering via IV, but that has many downsides when it comes to patient convenience.

The reason vaccines are the first successful application of this technology is because they only require very small doses to be effective. Compare the amount of protein that is in a flu shot (60 micrograms in Fluzone at most) to a typical mAb (~150 mg up to 1 g at most), you can see how much less the vaccine requires. I fully expect that as the upstream and downstream processes for LNP manufacture improve and are able to scale, that we will see mRNA take over what is currently the realm of biologics.

 

This mission, ELSA-M, is a follow-up on the proof of concept ELSA-D mission that was launched in 2021 and successfully rendezvoused with a client's satellite.

A challenge to this company going forward I see is that their interceptor requires a proprietary plate of their design to already have been affixed to the target satellite. I just don't see how this gets wide adoption enough to help meet their lofty preventing Kessler syndrome rhetoric.

 

cross-posted from: https://beehaw.org/post/698765

This article summarizes some of the challenges as well as opportunities that Ukraine is faced with in a post-Russian invasion world.

In addition to the brain-drain effect of talented scientists leaving the country, Ukraine has some structural issues as well:

The current research system is composed largely of the Soviet-style national science academy — for which the research agenda was historically set by state officials — and a university sector in which research is funded by the science ministry.

Entirely lacking is a modern, performance-based grant-giving system...the centrepiece of a new system would include funding streams for basic research, competitive grants and defence-related projects. Ukraine’s research strengths include agricultural technology, energy and planetary science

doi: https://doi.org/10.1038/d41586-023-02031-8

 

This article summarizes some of the challenges as well as opportunities that Ukraine is faced with in a post-Russian invasion world.

In addition to the brain-drain effect of talented scientists leaving the country, Ukraine has some structural issues as well:

The current research system is composed largely of the Soviet-style national science academy — for which the research agenda was historically set by state officials — and a university sector in which research is funded by the science ministry.

Entirely lacking is a modern, performance-based grant-giving system...the centrepiece of a new system would include funding streams for basic research, competitive grants and defence-related projects. Ukraine’s research strengths include agricultural technology, energy and planetary science

doi: https://doi.org/10.1038/d41586-023-02031-8

 

cross-posted from: https://beehaw.org/post/698268

This paper details a new hydrogel patch coated in microneedles used to delivery medication to tissues. The design of the patch was inspired by the Blue-ringed octopus and the method by which it administers toxins.

Unrelated to this paper (which is really cool) I feel like scientific figures have really fallen prey to a trend to cram too much information into each figure, making them impossible to comprehend. This paper as an example features two figures that go all the way from A through L. If you have to use almost half the alphabet to label your figures, maybe something can go to supplemental information.

doi: https://doi.org/10.1126/sciadv.adh2213

 

cross-posted from: https://beehaw.org/post/698268

This paper details a new hydrogel patch coated in microneedles used to delivery medication to tissues. The design of the patch was inspired by the Blue-ringed octopus and the method by which it administers toxins.

Unrelated to this paper (which is really cool) I feel like scientific figures have really fallen prey to a trend to cram too much information into each figure, making them impossible to comprehend. This paper as an example features two figures that go all the way from A through L. If you have to use almost half the alphabet to label your figures, maybe something can go to supplemental information.

doi: https://doi.org/10.1126/sciadv.adh2213

 

This paper details a new hydrogel patch coated in microneedles used to delivery medication to tissues. The design of the patch was inspired by the Blue-ringed octopus and the method by which it administers toxins.

Unrelated to this paper (which is really cool) I feel like scientific figures have really fallen prey to a trend to cram too much information into each figure, making them impossible to comprehend. This paper as an example features two figures that go all the way from A through L. If you have to use almost half the alphabet to label your figures, maybe something can go to supplemental information.

doi: https://doi.org/10.1126/sciadv.adh2213

 

This analysis examines the lack of availability of medications within several African nations. One of the primary drivers of medicine availability is the lack of marketing authorization for existing products with these nations regulatory bodies. Instead the study finds that drugmakers have been over-applying for less medically critical medicines, slowing down the process due to a lack of regulatory agency bandwidth.

doi: https://dx.doi.org/10.1177/01410768231181263

[–] wjs018@beehaw.org 3 points 2 years ago (1 children)

I added the link to the research paper above. Turns out the doi in the article is not correct.

 

cross-posted from: https://beehaw.org/post/697648

Exposure to microgravity causes changes to the human immune system:

"Here we show that the expression of many genes related to immune functions rapidly decreases when astronauts reach space, while the opposite happens when they return to Earth after six months aboard the ISS," said Dr. Odette Laneuville, an associate professor at the Department of Biology of the University of Ottawa, leading author of a new study in Frontiers in Immunology.

doi: https://dx.doi.org/10.3389/fimmu.2023.1171103

 

Exposure to microgravity causes changes to the human immune system:

"Here we show that the expression of many genes related to immune functions rapidly decreases when astronauts reach space, while the opposite happens when they return to Earth after six months aboard the ISS," said Dr. Odette Laneuville, an associate professor at the Department of Biology of the University of Ottawa, leading author of a new study in Frontiers in Immunology.

doi: https://dx.doi.org/10.3389/fimmu.2023.1171103

 

This is a meta-analysis showing that certain species are more impacted by urbanization than others. In particular, butterflies are susceptible and beekeeping could be exacerbating the issue by displacing native pollinators.

Research Paper: https://onlinelibrary.wiley.com/doi/10.1111/ele.14277

[–] wjs018@beehaw.org 3 points 2 years ago

Great article summarizing the BBB. The brain is one of the highest priority targets for biologics therapeutics (viral & non-viral gene therapies, antibodies, peptides, etc.) and one of the most difficult to access via traditional routes of administration (IV, subcutaneous). I have worked on programs in the past that tried to access the brain via other administration methods (intrathecal, intraparenchymal), but both of these are quite invasive and lead to adverse events purely from the procedure. Engineering ways to cross the BBB would open up a huge number of potential therapeutic options for neurological disorders.

One of the other high priority targets that is difficult to access is the eye/retina. It has a similar set of biological barriers that prevent access to sensitive areas that are medically desired. If you want more reading on the eye, see this paper.

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