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Was it the official container image or 3rd party? Whichever it was, they should get notified so that init script can get fixed to prevent similar happening to others.
Official image
Edit: official but from docker, not official from nextcloud, because I don't like AIO images, I like having everything separate
Edit 2: the documentation says to use named docker volumes. I don't like using volumes because I feel they're harder to backup, I want individual file control so I used mount points. Because they're assuming that everyone is using named volumes, they assume they can wipe without problems. But they don't specify to avoid using mount points and/or that's dangerous because of those assumptions.
3rd party, but the official image will do the same (
rsync --delete
). The 3rd party project has an issue open for it. I couldn't find a similar issue for the AIO image (but maybe I didn't search for the right thing).